Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis.


[Up] [Top]

Documentation for package ‘matchBox’ version 1.46.0

Help Pages

matchBox-package A package to produce Correspondence-At-Top plots (CAT-plots) between ranked list of genes.
calcHypPI Probability intervals calculation for CAT curves using the hypergeometric distribution.
computeCat Computing overlap proportions among ordered vectors
filterRedundant This functions removes redundant features from a data.frame
matchBox A package to produce Correspondence-At-Top plots (CAT-plots) between ranked list of genes.
matchBoxExpression Example data: ranking from three differential gene expression experiments
mergeData Merging data.frames based on common identifiers
plotCat Plotting correspondence at the top curves