Vignettes and other documentation


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Vignettes from package 'igvR'

igvR::v00.basicIntro "Introduction: a simple demo" HTML source R code
igvR::v01.stockGenome "Use a Stock Genome" HTML source R code
igvR::v02.customGenome "Use a Custom Genome" HTML source R code
igvR::v03.ctcfChIP "Explore CTCF ChIP-seq alignments, MACS2 narrowPeaks, Motif Matching and H3K4me3 methylation" HTML source R code
igvR::v04.pairedEnd "Paired-end Interaction Tracks" HTML source R code
igvR::v05.ucscTableBrowser "Obtain and Display H3K4Me3 K562 track from UCSC table browser" HTML source R code
igvR::v06.annotationHub "Obtain and Display H3K27ac K562 track from the AnnotationHub" HTML source R code
igvR::v07.gwas "GWAS Tracks" HTML source R code